rs29679033 SNP Detail

Summary

• ID
  rs29679033
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:64979384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAG CGGGGCTCCC CGCCTGCTGC
  R
  GGCGGTTCTC CTTCCTCTCT GAAGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45852004	mCV24258361	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148576876	ENSMUSSNP2444310	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29679033					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:64979384 () rs orientation: forward

Symbol	Name	Function Class
Klf3	Kruppel-like transcription factor 3 (basic)	within coordinates
Tssr46420	transcription start site region 46420	1082 bp downstream
Tssr46421	transcription start site region 46421	111 bp downstream
Tssr46422	transcription start site region 46422	37 bp upstream
Tssr46423	transcription start site region 46423	76 bp upstream
Tssr46424	transcription start site region 46424	179 bp upstream
Tssr46425	transcription start site region 46425	943 bp upstream