rs29682344 SNP Detail

Summary

• ID
  rs29682344
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:134943516 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCACTCTGTT CCCCCCTTCT CTGGTTGTAC GCGGGGCCGG
  CCCTCTTGAG ACAGAGGAAC TTGCTCCATC TCAACCTACT GTGACTAATG GGGGAAGCAT
  S
  GGCTGGGAAG GAGGGAGTGG ATAATGGATA TTGGTTTTCA TTATCCTGCC AGAGACACTT
  GAATCAATGC AGTTGGCAAT TGGTGAATAA AGAAGTAAT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45353363	mCV22314307	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss147641116	ENSMUSSNP6908344	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		C
ss320515732	CHEV_2_134927332	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29682344					SNP	G	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:134943516 () rs orientation: forward

Symbol	Name	Function Class
Plcb1	phospholipase C, beta 1	Intron
Rr565720	regulatory region 565720	within coordinates
Rr565721	regulatory region 565721	353 bp proximal