rs29689634 SNP Detail

Summary

• ID
  rs29689634
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:34756795 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAT CAGTCACACG ATAGTAGCCT
  R
  TCTCAAAATA AATACATTCC AAACT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39606263	mCV22875768	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29689634					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:34756795 () rs orientation: forward

Symbol	Name	Function Class
Brd8	bromodomain containing 8	within coordinates
Cpgi9821	CpG island 9821	342 bp proximal
Kif20a	kinesin family member 20A	882 bp upstream
Rr352687	regulatory region 352687	within coordinates
Rr370355	regulatory region 370355	236 bp upstream
Rr370356	regulatory region 370356	764 bp upstream
Rr405583	regulatory region 405583	984 bp upstream
Tssr5275	transcription start site region 5275	858 bp downstream
Tssr150465	transcription start site region 150465	879 bp upstream
Tssr150466	transcription start site region 150466	892 bp upstream
Tssr150467	transcription start site region 150467	1213 bp upstream
Tssr150468	transcription start site region 150468	1267 bp upstream
Tssr150469	transcription start site region 150469	1300 bp upstream
Tssr152814	transcription start site region 152814	820 bp downstream
Tssr152815	transcription start site region 152815	1030 bp downstream
Tssr152816	transcription start site region 152816	1080 bp downstream