rs29690066 SNP Detail

Summary

• ID
  rs29690066
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:22139916 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGTTCCCT CACATCCCCT
  GGAACTAGAG TTTCAGGTGA TTTTTGAGCC ACTGTGTGGA TTCTAGAACC AAACCCAGGT
  CCTTTGCAAG AGCAGAGCAG TAAGTGTTCT TAATTGAGCC ATCTTTCCAG CCTCCAGTTG
  CCTCTTTTAT GAAGATGTCT TAGAAAGCTC TATCCTTTCA GAGACATGAT CTATAATCAT
  S
  ATGAGTGTTT TGTATCACTG GTCTGCCTGC CTTTTGTGCA CCTTGGTTTT TAATACCTTC
  AATTATTTTT CCACATATTG GGTATAGGAA TTTGTATGTA GGAAAGTAGA GATTGCTTTT
  GAGAGACAGG TGATAGTAGT CAACATATTC TGGAACTTTC TCTAATCCTT CAAATTCTTT
  ATTCTTTGCC CAGGTAATTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47370566	NES11358387	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	C	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29690066					SNP	G	G	G	G	G	C	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47370566	NES11358387	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:22139916 () rs orientation: forward

Symbol	Name	Function Class
Gm11282	predicted gene 11282	1277 bp downstream
Zfp184	zinc finger protein 184 (Kruppel-like)	within coordinates