rs29691028 SNP Detail

Summary

• ID
  rs29691028
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:22140944 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCTGAAT TTAAATCACC
  ATTCTTAAAA TTTTTTTCTT TGCTGTTTAT TAACAGGGAA TCTCAATTCA GAATGTATCC
  TTCAGAGTGA GTCCTTTTCT TTGTACCCTT GGTGGTCTCA GGTTACCCCC CCCCTTTTTT
  TTTTTTTAAT TCATGGTTTA TTTGCCTGCC TCATTTGGCA GGACACATCT TATGAGCAGA
  M
  GTGTCCATTG TTGTACACTG CTTGGCTGCA AATGTGTCCA CAGGAGGATA TTAGGACCTG
  GGAGCCATAA GATCAAAAGC CTGAGCAGAA GTTCAGTCCC TCTCCATTTG AGGTTCTTGT
  TCTCTTTGGT GTGGCAGGGG TTTCGATGAT GAGCACTGTG CTAGTGGCTG TGTAGTCATC
  CTGCAAGGTG AAGTGCTGGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47370578	NES11358351	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A	C	A	C	C	A	A		C	C	A	C
ss148796950	ENSMUSSNP3069762	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						C				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29691028					SNP	C	C	C	C	A	C	A	C	C	A	A	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47370578	NES11358351	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:22140944 () rs orientation: forward

Symbol	Name	Function Class
Gm11282	predicted gene 11282	249 bp downstream
Zfp184	zinc finger protein 184 (Kruppel-like)	within coordinates