rs29691934 SNP Detail

Summary

• ID
  rs29691934
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:28681249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCTTGAAA GTGGGAGGCA
  GCACTGGAGA CAATTGTTGT GATACAGAAA AGGGGTGGAG CTAAACATTC TCCAGTTCCC
  AAAAGGGGTG GAGCTAAACA GTCACCAATT CCCAAAAGGG GTGGGGCTAA ACATCCTCCA
  GTTCCTAAAA GGGGTGGGGC TAAGCGTCCT GCAACAAAAG GGAATTCCTC ACAATATAAC
  R
  CCTCTGGCCC GAAATGGTGA AGGTGCTGGG CTGGGAAATA TTGAGCTCAG TTTTAGATCC
  CATCTTCTTC TGCAATTGTT TTCCTACTTG GATGACCCGG AATGAAATGA AAAAGTCCTT
  TAAACACCTT TTTAAAACTT ATTTCTTGTT ATTGCTAATT TAGTCATTTA ATTTTTCTCA
  TAGTAATAAA TCACAAAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46871574	NES10800080	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29691934					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46871574	NES10800080	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:28681249 () rs orientation: forward

Symbol	Name	Function Class
Rr374734	regulatory region 374734	within coordinates
Tnik	TRAF2 and NCK interacting kinase	within coordinates