rs29694392 SNP Detail

Summary

• ID
  rs29694392
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:21355426 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAATGAAT TCTGATACCT
  CCTGGGGGTT CAAATGACAA ACTCGGTGTC AACCAAGCAA GCTGTCAGGC ACAGCAGTGA
  ATCGTGGGCT TTCGAATGTA GACTATTTCT TGTTCATGTT ATTTTCTCTA CCACAATCAT
  AACTATTAAA TCCTTCCCAC CCCCTGGGAC TTCTCTTCAT CCTGTTTGAG ATTTTTAAAG
  R
  CTGCTTTCAG GGGCTGGAGA GATGCATTGC TCCATAGTTA AGAGCACTGG CTCTTCCAGA
  GATCCAGGTT CAATGATCAG CACACACATG GAACCTAACA AGGGTCTGTA ACTCAAGTTG
  CAGGGGACTA ACACCCTCTT CCAGTCTCCA TGGGCTCCAG TTTTTCACAT GGTGCACAGA
  TATACATGCA GGCTGAGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46872461	NES10965383	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs29694392					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46872461	NES10965383	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:21355426 () rs orientation: forward

Symbol	Name	Function Class
Agtr2	angiotensin II receptor, type 2	354 bp downstream
Rr9669	regulatory region 9669	1826 bp distal
Tssr160708	transcription start site region 160708	1852 bp downstream