rs29695218 SNP Detail

Summary

• ID
  rs29695218
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:21355845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAAATAAA AAATAATAAT
  GACAACAACA ACAATAATAA TAATAATAGT AAAGACTGGC TTCTGCTTCC ATAGGAGGCC
  AGTGGTGAAC CATGAGGGCC ATTGTTTTCT AGTTATTCCG AGAATTGTGA CCTGAACAGA
  TAATGCAGGA CCATGTGAGT TCTGACTGAG GGTATATTTA TGGCTACAAA TACCCTCTTT
  Y
  CTTCTTGAAA ATGTAAATGC CAGGTCACTT ATTAAGATGA TATGAAAAAT TTTATTCTTT
  CCATTTGGCC ATTTATCAAG ATTTCCCCTA TGAAGGGAGC AATGTGTGAC TGGTGCTGTG
  ACAGGTGCGT TATCCCATCT CATTCTCCCA AGGACTAAGG TATTTTCCAT CATGACACAA
  GTAAGAAAGG GAGGTTCACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46872467	NES10965333	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs29695218					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46872467	NES10965333	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:21355845 () rs orientation: forward

Symbol	Name	Function Class
Agtr2	angiotensin II receptor, type 2	773 bp downstream