rs29702581 SNP Detail

Summary

• ID
  rs29702581
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:113623253 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAC TAAGACCTGC TGAAAGGTGT
  R
  TTCCAGGTCC AGGCACAGAG CAAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46333766	mCV23322787	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss136989719	ENSMUSSNP1371390	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss323201094	CHEV_9_113703303	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29702581					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:113623253 () rs orientation: forward

Symbol	Name	Function Class
Clasp2	CLIP associating protein 2	within coordinates
Rr205836	regulatory region 205836	within coordinates
Tssr3045	transcription start site region 3045	884 bp downstream
Tssr87530	transcription start site region 87530	1433 bp downstream
Tssr87531	transcription start site region 87531	1343 bp downstream
Tssr87532	transcription start site region 87532	1193 bp downstream
Tssr87533	transcription start site region 87533	1116 bp downstream
Tssr87534	transcription start site region 87534	845 bp downstream
Tssr87535	transcription start site region 87535	827 bp downstream