rs29707781 SNP Detail

Summary

• ID
  rs29707781
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:37227695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCCTTTACCT ACACACTGGG GATTTGACCT CTATCTCCAC TCTCATTAAT ATGGGTGGCC
  TATTTGCTCT TATTAAAAGG AAAGGGGGAG ATGTTGGGAG CCGCGCCCAC ATTCGCCGTT
  ACAAGATGGC GCTGACAGCT GTGTTCTAAG TGGTAAACAA ATAATCTGCG CATGTGCCGA
  GGGTGGTTCT CCACTCCATG TGCTCTGCCT TCCCCGTGAC GTCAACTCGG CCGATGGGCT
  GCAGCCAATC AGGGAGTGAC ACGTCCTAGG CGAAGGATAA TTCTCCTTAA TAGGGACGGG
  K
  TTTCGTTTTC TCTCTCTCTT GCTTCTTACA CTCTTGCTCC TGAAGATGTA AGCAATAAAG
  TTTTGCCGCA GAAGATTTTG GTTTGCTGTG TTCTTCCTGG CCGGGCGTGA GAACGCGTCT
  AATAACAAAT GCTTCTCTCT TTCTTTCAAT AACCCCTATA TTCAGAAGTT GACTACTAAC
  TGATTAGGAG ATTGGCTTAA TTCTGACAAA GAATGGTAGG AGGGAAGAAA TTCTTAGAAA
  AATACCTAGA TTCCACTATC CTAAAACCTC CTGGGTTTGC CTCCATTTGA ATGTTCATCA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39109637	mCV23906704	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29707781					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:37227695 () rs orientation: forward

Symbol	Name	Function Class
F13a1	coagulation factor XIII, A1 subunit	within coordinates
Rr271551	regulatory region 271551	1306 bp proximal
Rr279043	regulatory region 279043	1402 bp proximal
Rr283270	regulatory region 283270	1906 bp proximal