rs29714293 SNP Detail

Summary

• ID
  rs29714293
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80543290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGACATTTA CCACATGACT
  CAGATCTAGT GCTGTACTTA GACACATTAT TCAAATTAAA CCACTCAGTT ATAGAACGAA
  AGGATAGAGA TTAAAATCTG TTACTTGTCA GGGAGCAAAT TATAATAAAC AGATAAGGAC
  TTCAAGGAGT AAAACGAATT CAGTTTCTTT AGTGTGAGAC TTGTTACCTC CATTCGGATT
  M
  TTCTCCTCAA TAAAAAACAA AACAAAACAA AACACCTAAA CAGGGCCGGA GACATGGCTC
  AGTGGTTGAG AGCACCAGCT ACTCTTCCAG AGGTCCTGAG TTCAATTCCC AGCAACCACA
  TGGTGGCTCA CAGCCATCTG TCATGGGATC TGATGCCCTC TTCTGGTGTG TCTGAAGACA
  GTGACAGTGT ATTCATGTAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	NZW/LacJ	PWD/PhJ
ss48379941	NES12270250	PERLEGEN	MM_PANEL2	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	NZW/LacJ	PWD/PhJ
rs29714293					SNP	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48379941	NES12270250	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80543290 () rs orientation: forward

Symbol	Name	Function Class
Rr405469	regulatory region 405469	1061 bp upstream
Rr405470	regulatory region 405470	1631 bp upstream