rs29714590 SNP Detail

Summary

• ID
  rs29714590
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:68051804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACTTGGGT CTTCTACCAG
  AGCAGTGGGT GCTCTCATGG CTCAACTGTG TCTCCAGTGC TGTGTGCCAA GCCTATTGGG
  GTTCATGGTG CTGCCTCACA CCAGGCCTTC TTCTTTGGTT GGATACAGAG CATTGTGGTA
  GTACAGTAAG TAAGGCAGAG GTACGGTTCA CCAACACCAA TGGATTTACT CAGATTTGCT
  Y
  GGAGCTGTGC GCCCTGCATG ATACAAATAC TTATTGACCG GTAACTAAAG TTTCCTCTAA
  AATATTTGGA ATTGAGTTAG GAAGATAAAC CTTAGGAAGC ACAACCAGGG GTATACAGAG
  AAACCCTGTC TTGAAAAAAA AAAAAAGGAA GAAATTCAAA TAGAAATGGA GTACTATGGA
  AATGGCACCA GTCAACTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss47874193	NES11927064	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs29714590					SNP	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47874193	NES11927064	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68051804 () rs orientation: forward

Symbol	Name	Function Class
Arid5b	AT-rich interaction domain 5B	Intron
Gm51770	predicted gene, 51770	within coordinates