rs29715646 SNP Detail

Summary

• ID
  rs29715646
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68054342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAAAAAGCC ATTTTAGTTG
  TGTTTACAGA AAACAAGCCT TCTTCCTCCT CCTCTTCCTC CCCTTTTCAT TTAACCCTGC
  CTGCCTCTTC TCCCCCTACC CCTTCTCAAA TTGACCTATA TGCATAGAAG CCATTTACTT
  CACACAGACA CACATCTAGA CTGCCTTTCA ACAGTGAAGG ACTGAACAAT CCTGAGAGTG
  R
  TTGAACATGT GTTAATTTTC AGGACGGCTG AGGTGGGAGC TTGGGGTTCC TGAGGTGTCA
  TTATTATACC ACATGCTGTG GGTCCACGAA TTAGATTTTA AAGCCGCTTC TGCTTTTTTA
  GTATAACATT AAAAACCATA TAAATTGAAA AAGCAATCTT TTTCTTCCTC TTCTTTTCCC
  TCTCTTTCCC ACCCTTCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47874199	NES11926887	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29715646					SNP	A	A	A	A	G	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47874199	NES11926887	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68054342 () rs orientation: forward

Symbol	Name	Function Class
Arid5b	AT-rich interaction domain 5B	within coordinates
Gm51770	predicted gene, 51770	within coordinates
Tssr98005	transcription start site region 98005	336 bp downstream