rs29715648 SNP Detail

Summary

• ID
  rs29715648
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68054929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCATTTGTA ATGTTTACCT
  TTCAATCTGT GACTTTCACG TTGTTTTCGT GAGGACTAAC CACTAGTACC CCCCTAAGAC
  TAACAAAAGT ACATTCATTG CCTGCTGCCA AATGATAACC GGCCCCAAAA CGTCTCTGAT
  GGAGAAGCAA ACTGGACATA GGATTATGTT TCTATTATAG TTGGGTATTA GTAGTGGTAT
  R
  AATTCTTCAT CTCCCAAAAC TTTCAATTTT AACTGGATTT ACATATGATG GTCTAGAAGA
  GACTCCAAAC TCACACATGA TTTACATGTG TAGGAATCAA ACTCAGGAAA ATCCTAAATT
  CTAAATACAG TAGATAATTC AGAAATGCCT TGCTGAATGG ATGCAGTTTA AATATTCTCA
  GCAGCCACCC GTACTACAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47874201	NES11926845	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29715648					SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47874201	NES11926845	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68054929 () rs orientation: forward

Symbol	Name	Function Class
Arid5b	AT-rich interaction domain 5B	within coordinates
Gm51770	predicted gene, 51770	within coordinates
Tssr98005	transcription start site region 98005	247 bp upstream