rs29717060 SNP Detail

Summary

• ID
  rs29717060
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:83481169 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGTGTCAAC ATGGTCATGT TTCCATTCTG AAGGCCACAA
  GGGAAGAAAG TCCTTGGCTT CTTCCTAGTT TCTGATGTCA TCTAGCAAAT TTTGGTATTC
  Y
  TTAACTGGTG TTTGTGTTAA TCCTCTGCTG TCTTTGCATT GCCTTTTTTC AATATGACGT
  TATTTGACCA TTATATCCAC AAAAACTTAT TTCCAAATA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45357393	mCV23818423	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss146812221	ENSMUSSNP5053172	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
ss320367689	CHEV_2_83490982	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29717060					SNP	T	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:83481169 () rs orientation: forward

Symbol	Name	Function Class
Rr397084	regulatory region 397084	1710 bp downstream
Zc3h15	zinc finger CCCH-type containing 15	within coordinates