rs29717431 SNP Detail

Summary

• ID
  rs29717431
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126559761 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTCTGAAG CACCCCCCCC TCCCCCACCC CACCCCACCC
  CTCCCACTCC TCATATTTCC ATTCATTCTG CTGGTCATCA GAGTCCTCTC CTTCTGTGTC
  G
  TCTGTACTCC CCCACCCCCA GCTGATCATG TTCCCCTTTT CCCTTCTCCC TCACCCCTCT
  CCCACCCAGG TCCCTCTCTC CCTCTGCCTC TTGTGGTTG                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss45354429	mCV23899105	ABI	CRAMUS_MOUSE	f	SNP	G
ss147510283	ENSMUSSNP5629946	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs29717431					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126559761 () rs orientation: forward

Symbol	Name	Function Class
Tssr19969	transcription start site region 19969	200 bp upstream
Usp8	ubiquitin specific peptidase 8	within coordinates