rs29717711 SNP Detail

Summary

• ID
  rs29717711
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:78720345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGAACTTG TTATCTCTCC
  TTGAATTAAT TTTGGATTTA GTTTGTTCTT GCTTTTGTTG CCTGAATTGT ATCTTCAGGT
  TGCTCCTTAC TGTTCCCCAC TCCTTTCTCT TATCATGCAT ATATATTGCT GCAAATATCA
  CTGCTTGCTA TGTTTGTGTG TGTTATTTTT ATTTTCATCT TGTTACCACG ATTTTTTTTT
  W
  AAAAAATTCC CCAGGGTCCC ATTCATTAAA TACCATGTTT AGTTCTCTGT ACAACTTTTA
  AAGATTTGTT TATTTCTGTG ATGGCAAAAG CGTGTGCACC GTGGCTTCAG TAAACCTGAA
  TACTTGCCCC GTTTACTAGA CTAGACCTGA AAATATAAAC AGTATTGGTA CTAGTTACTT
  GTCTTGTTGT TGTGACACCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45357108	mCV25372828	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
ss146781773	ENSMUSSNP4700886	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs29717711					SNP	T	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:78720345 () rs orientation: forward

Symbol	Name	Function Class
Gm51431	predicted gene, 51431	within coordinates
Ube2e3	ubiquitin-conjugating enzyme E2E 3	within coordinates