rs29718615 SNP Detail

Summary

• ID
  rs29718615
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62226934 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTAGTGTGTG GCAAGCTGCT GCTAAAACCA ACCTTCACGC TCGACAAAAG AATTAAAATT
  GAGATCTCAA AGAGATCTCA ATGGGTACTG TACTGGCTGG TCTTGGGTGT CAACTTGACA
  CAAACTGGAG TTATCACAGA GAAAGGAGCC TCCCTTGAGA AAATGCCTCC ATGAGATCCA
  GCTGTAAGGC ATTTTCTCAA TTAGTGATCA AGGGTGGGAG GGCCCATTGT GGGTGGTGCC
  ATCCCTAGGC TGGTAGTCCT GGGTTCTATA AGAAAGCAAG GTGAGCAAGC CAGGGGAAGC
  R
  AGCCAGAAGG CAGCACCCCT CCACGGCTTT TGCATCCACT TCTGCCTCCA AGTTCCTACC
  CTGTGTGAGT TCCTGTCCTG ACTTCCTTTG GTGATGAACA GCAATGTAGA AGTGTAAGCT
  GATTAAACCA GTCCCTCCCC AACTTGCTTC TTGGTCATGA TGTTTCATGC AGGAACAGAA
  ACCCTGACTA AGACAGGTAC TCTCTTATGG TCATTGCAGC ACTATTTACA ATAGTGTCCA
  CCCCTGATGA CTGTAATTAT CTCTGTCTGT CTGTCTGTCT TTCTCTCACA ATCACCAGTC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39606453	mCV23225882	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss147264905	ENSMUSSNP1416767	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
ss325648561	CHEV_18_62253517	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29718615					SNP	G	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62226934 () rs orientation: forward

Symbol	Name	Function Class
Gm41750	predicted gene, 41750	within coordinates
Rr354924	regulatory region 354924	1068 bp proximal