rs29719806 SNP Detail

Summary

• ID
  rs29719806
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:43859787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATCA TTCTTCATAG GTTGAAGCTT
  W
  ATGTACTTCC CGGTGTTGAT AGTTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39608722	mCV24147672	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss147020858	ENSMUSSNP1804138	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss325601064	CHEV_18_43886376	CHEVERUD	SCREENING_POP	f	SNP					T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29719806					SNP	T	T	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:43859787 () rs orientation: forward

Symbol	Name	Function Class
Rr345822	regulatory region 345822	214 bp proximal
Rr348914	regulatory region 348914	1187 bp distal
Rr356243	regulatory region 356243	239 bp proximal
Rr393629	regulatory region 393629	828 bp downstream
Spink1	serine peptidase inhibitor, Kazal type 1	1347 bp downstream