rs29719849 SNP Detail

Summary

• ID
  rs29719849
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:91035673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCA CTTGGGAGGC AAAGGCTAGT
  R
  GATTCCTGAG TTTGAGGCTA GCCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45358094	mCV23155026	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss146923657	ENSMUSSNP797649	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320391969	CHEV_2_91045485	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29719849					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:91035673 () rs orientation: forward

Symbol	Name	Function Class
Acp2	acid phosphatase 2, lysosomal	within coordinates
Tssr18872	transcription start site region 18872	484 bp upstream
Tssr18873	transcription start site region 18873	697 bp upstream
Tssr18874	transcription start site region 18874	1129 bp upstream
Tssr18875	transcription start site region 18875	1181 bp upstream
Tssr18876	transcription start site region 18876	1205 bp upstream
Tssr18877	transcription start site region 18877	1451 bp upstream