TTTTCCTGAA TCATGGATTT CAGAAGTCTG TAAACTTTAG TTCAGTTTCT GCCTATGTGT TGCGTATCTC CTCAGGAATA AATAGCTAAG TGAAACGAAG Y AAGTCAGATC AACCCTGTTG GCTATCCTTG TCCTTCCTCT TGGCTCCATC CTTACATTCT TGGTTTCCTT CAAAGTGTTT GTATTGTCAC TTAGCACAA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss45356932 | mCV24941028 | ABI | CRAMUS_MOUSE | f | SNP | C | T | C | |||
ss147345337 | ENSMUSSNP797627 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | T | T | |||
ss320477919 | CHEV_2_119721663 | CHEVERUD | SCREENING_POP | f | SNP | C | T | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs29720196 | SNP | C | T | C | T | C | T |
Location: Chr2:119726408 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
4930485G23Rik | RIKEN cDNA 4930485G23 gene | within coordinates | ||||||
Cpgi12132 | CpG island 12132 | 961 bp proximal | ||||||
Gm75581 | predicted gene, 75581 | within coordinates | ||||||
Gm75585 | predicted gene, 75585 | within coordinates | ||||||
Mga | MAX gene associated | Intron | ||||||
mRNA-UTR | ||||||||
Noncoding-Transcript-Variant | ||||||||
Rr563600 | regulatory region 563600 | 608 bp proximal | ||||||
Rr563601 | regulatory region 563601 | 1220 bp proximal | ||||||
Rr563602 | regulatory region 563602 | 1312 bp proximal | ||||||
Tssr19669 | transcription start site region 19669 | 1285 bp upstream | ||||||
Tssr19670 | transcription start site region 19670 | 1620 bp upstream | ||||||
Tssr25831 | transcription start site region 25831 | 1193 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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