rs29720428 SNP Detail

Summary

• ID
  rs29720428
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127901058 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAAGAAAAA CAAGAGCTGA GCATTCTTCA TAAATGAACA
  TCAGCAACAT AGTGACTGAC GCCAATAATA TATTTTAAAA ACAAATCACA TTATAACAGA
  Y
  GTATTTATTC CAGAATTGTA AGATAGGTTT GATGTTAAAT ATTAACCAAT AATATAAACA
  ATGGAAGTTA TAATACAAAA ACAAAAAACA AAACCTTCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45354359	mCV23907229	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29720428					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127901058 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	within coordinates
Rr397293	regulatory region 397293	1853 bp upstream
Rr564634	regulatory region 564634	1712 bp proximal