rs29730456 SNP Detail

Summary

• ID
  rs29730456
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:100738905 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTCATATA TATATCATAT ATATAATATG TGAGTCTGTG
  GGGGCCATTC TCATTCCAGC CACCACACTG TTATTTTATT TCACATGTAT GGGGTTTGCC
  Y
  CTGTGTAGGT CTGTGTCTAT GGAGGGCATG AGACCCCCAG GTACTGGGGT TATAGATGGT
  TGTAAGCCAA CATGTGGGTG CTGGGAATGG AACCCAGGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45854782	mCV24997275	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss148926346	ENSMUSSNP863663	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29730456					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:100738905 () rs orientation: forward

Symbol	Name	Function Class
Gm43510	predicted gene 43510	1365 bp downstream
Gm71819	predicted gene, 71819	within coordinates
Gm73858	predicted gene, 73858	1321 bp downstream
Rr115113	regulatory region 115113	96 bp proximal
Rr125578	regulatory region 125578	43 bp distal