rs29732417 SNP Detail

Summary

• ID
  rs29732417
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:66370161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGCCTAACA GTTACCTAGC AATAGTCAGG CATGACCCTG
  ACTTGCTATA AAAGGACTTT TTGGCTTCTC TGGCCTCTCT CCCCCTGCCC CCTGCCCCCG
  M
  CCCCCACTGA CCCCCCCCCC AACACACACC AATTAGTGTC ACTTCCTATC CAGAGGTGTT
  AGGCCTTTCG AAATTTAGAA AACTTGGACT ATCCAGAGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J
ss45856460	mCV22883474	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J
rs29732417					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:66370161 () rs orientation: forward

Symbol	Name	Function Class
Gm3822	predicted gene 3822	1929 bp upstream
Gm73278	predicted gene, 73278	1808 bp upstream
Gm73415	predicted gene, 73415	1390 bp downstream
Rr378070	regulatory region 378070	1045 bp upstream
Tssr51198	transcription start site region 51198	1726 bp downstream