rs29733059 SNP Detail

Summary

• ID
  rs29733059
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:16805118 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  TCCACCTTCA TGTGGTTTGT TACAGGGTCA AACTTGGGTC ATCAGGTTTG GGGGACAGGC
  ACCCATCCAC TCCCACTTCT TGGCCCTGTT GTTCCCCTGT ACTGAGGCAT ATAAAGTTTG
  CACAACTAAT GGGCCTCTCT TTCCACTGAT GGCCGACTAG GCCATTTTCT GATTCATATG
  CAGCTAGAGA CACCAGCTCC AGGTGGGTAT TGGTTAGTTC ATATTGTTGT TCCACCTATA
  GGATTGCAGA TCCCATTAGT TCCTTGGGTA CTTTCTCTAG CTCCTCCATT GGGGGCCCTG
  W
  GATCCATCCA ATAGCTGACT GTGAGCATCC ACTTCTGTGT TTGCTAGGCC CCAGCATAGT
  CTCACAAGAG ACAGCTCTAT TTAGGTCCTT TCAGCAAAAT CTTGCTTGTG TATGCAATGA
  TGTCAGCGTT TGGAAGCTGA TTATAGGATG GATCCCCGGA TATGGCAGTC TCTAGATGGT
  CCATCCTTTC GTCACAGCTC CAAACTTTGT CTCTGTAACT CCTTCCATGG GTGTTTTGTT
  CCCAATTCTA AGAAGGGGCA AAGTGTCCAC ACTTTGGTCT TCGTATCTTA TATCTTGGGT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45855776	mCV24959609	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29733059					SNP	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:16805118 () rs orientation: reverse

Symbol	Name	Function Class
Rr370925	regulatory region 370925	1730 bp upstream