rs29734301 SNP Detail

Summary

• ID
  rs29734301
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:33599115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAT GATGGTACCA GATGGTGAGA
  R
  AGAGGCCTGA GGTCAACATG ATCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39610910	mCV24705913	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss146926524	ENSMUSSNP2513080	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss325579802	CHEV_18_33625716	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29734301					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:33599115 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9808	CpG island 9808	1562 bp distal
Gm10549	predicted gene 10549	within coordinates
Rr345143	regulatory region 345143	1886 bp proximal
Rr352671	regulatory region 352671	1114 bp distal
Rr353761	regulatory region 353761	1887 bp proximal
Tssr152768	transcription start site region 152768	1998 bp upstream
Tssr152769	transcription start site region 152769	1676 bp upstream