rs29736537 SNP Detail

Summary

• ID
  rs29736537
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119898281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGA ACCACCCCCA TCCTATTCCA
  R
  CTCACCGACT CCGTGTCCTT ATTCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss46335898	mCV24883783	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss137051602	ENSMUSSNP3436518	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
ss323224495	CHEV_9_119978333	CHEVERUD	SCREENING_POP	f	SNP				A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs29736537					SNP	G	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119898281 () rs orientation: forward

Symbol	Name	Function Class
Cx3cr1	C-X3-C motif chemokine receptor 1	919 bp upstream
Gm33858	predicted gene, 33858	within coordinates
Rr688628	regulatory region 688628	1446 bp proximal
Tssr92011	transcription start site region 92011	924 bp upstream
Tssr92012	transcription start site region 92012	914 bp upstream