rs29738502 SNP Detail

Summary

• ID
  rs29738502
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115060518 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCAGGTGTCC TACCTACTCT CTTAGCACCT GCTATGAGGA TGGGTTGTTG GCTGTGGGGT
  GAGCAAGGGC ACCCTAGTGA CATGGATGGG GGAGAGGGAA CTTATGGACA GGAGGTAGAA
  GCTGAGGCTG GTACTTGGGA AACTGCCTCG AAGGGTCTCC TTCCTGGGTG GGTGCTTCGC
  TCAGATGACA GAAATCCTTG AAGCTTTCCC TGAGGGGAGT CCTGTCTATG CAACAGCTTG
  CCTGACTCAT ATGGAAATTT ATTCATTAAA AAGCAAAACA AACAAACAAA CAAACAAACA
  M
  ACACCCCACT ACTTGAAGTT CTATTTCTGG GGCTTGGTAA AAGCCACTGT CTGTGACAGG
  ACTAGGGACA CATGTCACCC TGACACAAGG ATGCTTAGCT CCCCTTGATG CACTTCCTTC
  CGGTCCATCA CTTGATTACA GATGCCCATT CCCTTTTTCC TTGCCTGGTG GCTGAACGGT
  GGCATTCCTC CTGTGGCATC TGTCCTCGGA CACACTGTGA TGGACACCTG CCAAAAAGCC
  TTCACTGGGT AGGCAGGCTT CCACATCATT GGTCTGTGTG CCTCCTCCCT TCACCCCCAA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46337013	mCV23362046	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29738502					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115060518 () rs orientation: forward

Symbol	Name	Function Class
2210411A11Rik	RIKEN cDNA 2210411A11 gene	1426 bp upstream
Osbpl10	oxysterol binding protein-like 10	within coordinates