rs29740460 SNP Detail

Summary

• ID
  rs29740460
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:63372944 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTCAAGTC AGAACCTAAT
  AAAACTTTGC TATGTATGTC CAACAAATAT CCATCACATA CACTAAAGCT AACTAGCGAC
  CCACAATACA CACAGGGCTT AGTAAGCAGC CATGGGACAG AGGAGATAAC AACTCATTAG
  CACAATATCG TAAGCAAAGT ATCAGGTAGA CTGAATGCCC TCTAAGGACA CAGTGTCACT
  M
  TTCCAAAAGC CAGGCAACTT GTTCCTGCTC TAAATCACAG GCTTTCGTTT TATGTCAGCT
  TCTGGGTGGG GCACCATCGG ATCCACAAGG CAGGCAGGGC TGGTCAGACT GGTTAACACA
  TGACCTAGGA AAGCTGAGCC CAAGACACAC CTTCCACCTT CTTACCCTGC TCAATCACCA
  CACTGCATCT CCCACCCCAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46337033	mCV25256989	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss136555693	ENSMUSSNP2478544	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
ss322983321	CHEV_9_63313469	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29740460					SNP	A	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:63372944 () rs orientation: forward

Symbol	Name	Function Class
Gm16759	predicted gene, 16759	within coordinates
Iqch	IQ motif containing H	within coordinates
Rr204519	regulatory region 204519	within coordinates