rs29741009 SNP Detail

Summary

• ID
  rs29741009
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103290826 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAA GGGGAATCAG TAACCGGAGT
  R
  GAAACCCGGG GTGCACACAC CCCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46336140	mCV25258239	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss136877681	ENSMUSSNP302583	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29741009					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103290826 () rs orientation: forward

Symbol	Name	Function Class
D9Mgc25	DNA segment, Chr 9, MRC UK Mouse Genome Centre 25	662 bp proximal
D9Mit242	DNA segment, Chr 9, Massachusetts Institute of Technology 242	111 bp distal
Gm47328	predicted gene, 47328	within coordinates
Gm69201	predicted gene, 69201	within coordinates
Rr198513	regulatory region 198513	1226 bp distal
Rr198514	regulatory region 198514	826 bp distal
Rr207103	regulatory region 207103	within coordinates