rs29743077 SNP Detail

Summary

• ID
  rs29743077
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:41114790 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAG AGTCTGCTGT TGCTCATTGT
  R
  AAGAGGGGAT TTGAAAGAGT TTTAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46336661	mCV25029820	ABI	CRAMUS_MOUSE	f	SNP		A	A					G	A
ss50701305	NES14261030	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A		A	A	A		G	A	A	G		A
ss136348372	ENSMUSSNP3201811	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A						A
ss322923622	CHEV_9_41011577	CHEVERUD	SCREENING_POP	f	SNP												A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29743077					SNP	A	A	A	A	A	A	A	G	A	A	A	A	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50701305	NES14261030	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:41114790 () rs orientation: forward

Symbol	Name	Function Class
Gm68881	predicted gene, 68881	1957 bp downstream
Rr194790	regulatory region 194790	1211 bp proximal
Rr194791	regulatory region 194791	1811 bp proximal