rs29743708 SNP Detail

Summary

• ID
  rs29743708
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:113174226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGA AGAGGGGTAC TATTATGATA
  M
  CAGCTATTAG TGGCTTGGGG TGACA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39114404	mCV23842189	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
ss145257098	ENSMUSSNP2264540	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29743708					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:113174226 () rs orientation: forward

Symbol	Name	Function Class
Cdc20b	cell division cycle 20B	within coordinates
Gm10735	predicted gene 10735	1609 bp downstream
Mir449a	microRNA 449a	68 bp downstream
Mir449b	microRNA 449b	194 bp downstream
Mir449c	microRNA 449c	1601 bp downstream
Mirc34	microRNA cluster 34, including Mir449a through Mir449c	68 bp distal
Rr486472	regulatory region 486472	1567 bp distal
Rr486473	regulatory region 486473	555 bp proximal
Tssr121166	transcription start site region 121166	78 bp downstream