rs29743722 SNP Detail

Summary

• ID
  rs29743722
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:23217106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCAACCTA CTGTGCTGCA
  TGCAGCCATA CTAAGGACTC ATAACTCATA CACTCATTTA CGCATCTCAT GGCAGCAGCT
  AACACCTCAT CAATCCCCTT CTGCTGGGTC CTACCCTGAT GGATTGTTCA ATTTTCCTGA
  CATAGAGGAC TGCCTTAAAA AGTAACCAGT AATCATTTAT ATGGAGTGAA CTCACAAAAT
  K
  GCCAATATAA AAAATTTTAA ATATTAAAAC AGAAATACAA GATACAAACT TAGTAGCCAA
  ACACAAATCT AGACATTGTT GTGCTAATCA AGATGCAGAT AAGAAAGAGA TGTAGAACAA
  AGGAGGAGAG ATGTGAAAGG TAAAGTAACT AAATGTGAGA GATGCTGCAG GTGTTGAGCA
  GCAGGGTTTC CCAGTGTCTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47376083	NES11375691	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	G	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29743722					SNP	T	T	T	T	T	T	T	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47376083	NES11375691	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:23217106 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r214	vomeronasal 1 receptor 214	1402 bp upstream