rs29744419 SNP Detail

Summary

• ID
  rs29744419
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80016671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGAAAAGA CTGTTCTGTT
  ACTCAGTTCC CTGATGTCAA AACGGATTGA TTTAGTCAGG CTCGTTTCCT GGAATTGGGC
  AAATTTCACT CAACTGATTA TACTTTTTGG TTTGCAATAT GACATAAGAA ATATATTATT
  CAAGTGTTTT CCTGATTGAA TAGTTAATAT TCATATGATG TTTATGAGCA GTTAGGTAAA
  W
  TTTTATATGC ATTGAATACT ATTTGGGAAC ACTGGGTTCC TTTTTTAGTT TATCAGACTT
  ATTACTGAAA CCAGTTCATT ACAATCCCAA ACTTGAAACC GTAAGCTAGC CCAGCAAATC
  TTTTTCTCCC TTATAACTGG AATACTTCAT CTGAGCACCC AAATGAGGTT CGGCTTTAAC
  TTATAAACAT TTTTTACCAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	DBA/2J	NOD/ShiLtJ	WSB/EiJ
ss48381219	NES12267676	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	DBA/2J	NOD/ShiLtJ	WSB/EiJ
rs29744419					SNP	T	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48381219	NES12267676	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80016671 () rs orientation: forward

Symbol	Name	Function Class
Cyp1b1	cytochrome P450, family 1, subfamily b, polypeptide 1	within coordinates
Tssr149448	transcription start site region 149448	1723 bp upstream
Tssr149449	transcription start site region 149449	1583 bp upstream