rs29744421 SNP Detail

Summary

• ID
  rs29744421
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80016254 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTCAACTT AAAAAACAAC
  TACAACAACA ATAGTAAGAA CTCGGAAAAA GAAACTACCA ATTACTGGTT GTAGTGAGCC
  TCCTATCATA TGGTCTCTAA TGAACACCCA GAACATTCAT GGCCTTTATT TACTTATCAT
  TTATTTATTT TTACATTTGG CATTTGTTCT TAGGCAAAGG TTAGGTTTCT CACCTTCTGC
  K
  AGATAATGAT CACATTTTCT CTAGCTTCAA CTGGAACGAA ATAATCAAGA TGGATTTTAA
  ACTAATTTAA AAATCGAAGC AAACCAAGAA TTTGTAAGCT TAACATATTA ATGGGGTCAA
  TTCCAAAAGA ACCATCCATG TTGTAACTAC AATTACCAGA TCAGAACATA TTTCGCTGGT
  TTAGTTTTGA GATTTGTCCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss48381222	NES12267671	PERLEGEN	MM_PANEL2	f	SNP	G	G	T	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29744421					SNP	G	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48381222	NES12267671	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80016254 () rs orientation: forward

Symbol	Name	Function Class
Cyp1b1	cytochrome P450, family 1, subfamily b, polypeptide 1	within coordinates
Tssr149448	transcription start site region 149448	1306 bp upstream
Tssr149449	transcription start site region 149449	1166 bp upstream