rs29744601 SNP Detail

Summary

• ID
  rs29744601
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:23218040 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGGAAGGA AGGAAGGAAG
  GAAGGAAGGA AGAAAGAAAG AAAGAAAGAA AGAAAGAAAG AAAGAAAGAA AGAAAGAAAG
  AAAGAAAGAA AGAAAGAGGT CTTTATGGTC CCCTACAGAG AGAATAAACT ACAGAAGCTG
  AGCTTTCCCC AACTGCTAGT GCTCATGTCC CCTCATGCAT TATAAGCCAA GGACAGATGC
  K
  GTCTCTTTTC CTGCTCAGTG CCCTCCCCTG TTAAACAAGC TTTTAGAAGG AGGCATTGAA
  GTACAAGAAT AGAAGCAATA GAGAGAGAGA GAGAAATCAT TTATGGCAAT AAGAAAATAA
  ATTGCTATTT TAAAATACCC TGAAGTGTTT AGATTAATGA ATGATGAGGT AATCAGTTCA
  ATTGAGGATG TGCTGCACAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss47376092	NES11375579	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs29744601					SNP	T	T	T	T	T	T	T	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47376092	NES11375579	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:23218040 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r214	vomeronasal 1 receptor 214	468 bp upstream