rs29744938 SNP Detail

Summary

• ID
  rs29744938
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67009910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTTCACTGT TATTTATTAT TATTTATTAA TGTTTTCCTA
  GTGTCTAATT TTATAGCATC TAATCTGAAA ACTAGCAAGC AATGTGTGTG TGCGCGTGTG
  Y
  GCTCTTTTAG GTATGAAGGC CTCCATTAGG AAAGAGCCTC CCTCAGGCCT CCTTCCCCAG
  CACAGGCCCC ACATAGTGAC AGGGCCACGG AAAGGAGAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46337865	mCV24194472	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss136577267	ENSMUSSNP6729837	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss322989550	CHEV_9_66950435	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29744938					SNP	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67009910 () rs orientation: forward

Symbol	Name	Function Class
Gm10646	predicted gene 10646	within coordinates
Gm22145	predicted gene, 22145	1580 bp upstream