rs29747937 SNP Detail

Summary

• ID
  rs29747937
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:6166527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGAATAAA TAAATGAGGA
  ACTGTTGTGA TCATAAAAAG ATAAAGGTAG TATAAGATTA TGTTCTAAGG GGGTATAGTG
  AGATGTGGGG GGTGGGGGTG CCTCAGCGGA CCCATGCTGA GGCATCCCTT CTCCCTGAGA
  GTCCAGCCAC ACAATGATAT AGCATGGAAT AGAGGTTATT TAGGGCATGA GGAGGAGAGT
  K
  AAGAGGGTAA CAGAGGCAGA GAAAGGCATA AAGAAAGAGA GAGCAGAGAA ATAGAGGCCG
  GCCATAACCA GGATGAGAGG TGGGGAAGGG AATGGGGCAA GAGGCAAGAG AGAGAAGCGG
  GAGTAAGAGA ACAAAAGAGG CAAGAGAGCC AGGAGGGGGC AAGCAGCCTC TTTCAGAGTG
  GGCCAGGCCT ACCTGGCTGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46338829	mCV22333225	ABI	CRAMUS_MOUSE	f	SNP	G	T	T
ss136187894	ENSMUSSNP6934674	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29747937					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:6166527 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21338	CpG island 21338	1873 bp proximal
Tssr83664	transcription start site region 83664	1922 bp upstream
Tssr83665	transcription start site region 83665	1943 bp upstream