rs29750634 SNP Detail

Summary

• ID
  rs29750634
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109485061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATTTCAGT GATTTAACTT
  ATGAATGAAG CTACCCTGAG GAAAATCTAC AGCTTATGTG TACTTCTTAA ATGGGGGCTT
  CTCTGACGAA ACCATGTCCC TGTACCCACA AAGACAAATT CCAACACACA TAAAAAGAAA
  GTTCCTCTTA GGAAAATCTC AATAATTCAA TGGTCCCACA TACAACTTCA CATCTACTTG
  Y
  ATAACAAAAA TTAAAAAAGA AATAAATCCT TCATTAGTTC TGAGATTACT GCAGTAGTTA
  AGTAACAAAG AATTCAATGC AATTCATCTA TAATCAAAAC ACATTATCAG TTAAATGTTT
  TCTGGAGCCA GAGCTCTGGG CCTTTGGTTT GAGGTTCTAT ACCTTTTTTC AGTCATTGGT
  CTGTCATGGC CCAGAAATAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46878984	NES10702649	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29750634					SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46878984	NES10702649	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109485061 () rs orientation: forward

Symbol	Name	Function Class
Rr583434	regulatory region 583434	457 bp proximal
Vav3	vav 3 oncogene	Intron