rs29753156 SNP Detail

Summary

• ID
  rs29753156
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:50911114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACAGGATG AGCTACCTAC
  CGCCAGTCTC CTATATAGGC CTGTCTCCTA TAGCACAAAA TGGTCACTCA AAGAGATCGC
  CCTTCCCCGC TCCCCAGCAC GGGTACTAGG AAGCAGCCTC AGAAGCAGAG GTGGAGGCAG
  TTACAAAGAG CAAGGACAGT CATATTTCCA TAACTTGATG CACATGGTGG AGGATCTGCC
  R
  GCCCATGGAA ATTGCCCTGA CGTTTGAAAG GAAAGATTGG TTGGAGCCCT GCTCCTGTTG
  GCCCCTGGGT AAAGAAACCC TGCAAGAGAG ACGTGAAACC AACTCCATTT CCACTGGAAG
  TGTCTCTTCC TTTGGTTCAA CAGCCCAAGC CCCTCCCAGA AAGCGCCCGT CCCCCAACCT
  CCACCCCCAG TGTCCCTGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss45880514	mCV23305838	ABI	CRAMUS_MOUSE	f	SNP	G	A		A		A
ss47876610	NES11680070	PERLEGEN	MM_PANEL2	f	SNP		A	A		G	A	A	G	A	A
ss133185737	ENSMUSSNP6331892	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A				A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs29753156					SNP	G	A	A	A	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47876610	NES11680070	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50911114 () rs orientation: forward

Symbol	Name	Function Class
Gm31686	predicted gene, 31686	751 bp downstream
Gm67430	predicted gene, 67430	within coordinates
Rr543	regulatory region 543	within coordinates