rs29754391 SNP Detail

Summary

• ID
  rs29754391
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68634023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTTTGTG GGATCAGACC
  AAGACACCTT CACTTACACT GTAACAGGAC AGGAGTGTGC CCCACTATTG GACTTTAGAA
  CAGTGACATT CATACTGTCC TATTGGAGTA GGGCTGTAGC CAAGTAATCC TAACTCATGC
  AGTGTTACTT TGGAGAATTT TACAGAATGC CAAGAGCCTA ACAAGCTGTT CTGAAACTTA
  M
  TTTCTTAACT AAATACTTTA TGTGTCGCCT GTCTACCTCG ACACCATGTA GGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TTTGTGTGTG TGTGTCTATA
  TACCTGAACA CAGTACTTCA TGAGTACACA CCCCTGAGCT CTATCCCCAA ACCCCTGGTT
  ACCTTCTCAC CATGTTCCCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
ss47877971	NES11929922	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A		C	A	C
ss323352698	CHEV_10_68260941	CHEVERUD	SCREENING_POP	f	SNP						C				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
rs29754391					SNP	A	A	A	A	A	C	C	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47877971	NES11929922	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68634023 () rs orientation: forward

Symbol	Name	Function Class
Gm32931	predicted gene, 32931	587 bp downstream
Rr384879	regulatory region 384879	1534 bp downstream
Rr433301	regulatory region 433301	1771 bp proximal