rs29755889 SNP Detail

Summary

• ID
  rs29755889
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84412202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCATTCTCT TCTGGTGAAA
  TGTCTAGCAG ATGTAGAAGC AAGACGGAGA CCCCATGGGG ACTGTGCGTC CACACCCACC
  TCTGAGCTCC CACCTCACTT TGTGCTGTCA TGAGAGTAAA AAAACACCCT GATTTTACTC
  TGCCCCAACA CTGTGCCAGT CTCCAGTTAG TCTTCTCAAG CAAGCTACTA GCCCGACGCC
  R
  TGCTTGTGCT CATTTTGCAG ACAGCAAACC AAGGCTCAAG CAGTCTGGCC AGGTGCAACC
  CAACTGAGAA GGGTAAAAAC TATGTTGCAA AGACTATGTT GCCCACTCAA ATCTGTTTGG
  TTTCAAAGAT CACATCATTT TAAGGGCTAC CTGAGAGACC CTGGGGCAAG AAGAGATGAA
  GCTGTCAAGA AAGTGACAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss48383785	NES12277778	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs29755889					SNP	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48383785	NES12277778	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84412202 () rs orientation: forward

Symbol	Name	Function Class
Gm65799	predicted gene, 65799	1282 bp upstream
Rr531984	regulatory region 531984	1293 bp distal
Rr531985	regulatory region 531985	983 bp distal
Rr531986	regulatory region 531986	117 bp distal
Tssr146027	transcription start site region 146027	1126 bp downstream
Tssr149628	transcription start site region 149628	1248 bp upstream
Tssr149629	transcription start site region 149629	1629 bp downstream