rs29757079 SNP Detail

Summary

• ID
  rs29757079
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:115665517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTTGATGA GGTAGCCTTG ACCAATCTTG TAAATCTTAT
  TGTTAATCTC TGTTCGGTGA TGGTAGCCTT TCTGCCCAGC TCGAGCCACA GAGAAGGCGA
  Y
  ACGGGCATGG TGCCAGGCTC CAATACAGGC AACTTTGCGC AAACCTCGAT GGGTCTTTCA
  GGGCAGTTTC TTTGTATGCC AACGACTGGT TAACCCTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39114835	mCV25027834	ABI	CRAMUS_MOUSE	f	SNP	C	C		T
ss145345352	ENSMUSSNP3534077	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss324536110	CHEV_13_116319189	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29757079					SNP	C	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:115665517 () rs orientation: forward

Symbol	Name	Function Class
Gm6035	predicted gene 6035	within coordinates
Tssr124162	transcription start site region 124162	812 bp downstream