rs29762570 SNP Detail

Summary

• ID
  rs29762570
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:64203755 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTT ACATCTCACA GGCCACAGCC
  Y
  GTCACTGAGG GCAATCAGAG GAGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39115299	mCV24779995	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss149158416	ENSMUSSNP6809833	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss324378679	CHEV_13_64157249	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29762570					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:64203755 () rs orientation: forward

Symbol	Name	Function Class
Gm30999	predicted gene, 30999	298 bp upstream
Rr273309	regulatory region 273309	1646 bp proximal
Rr280021	regulatory region 280021	1573 bp distal
Rr388579	regulatory region 388579	903 bp downstream