rs29765903 SNP Detail

Summary

• ID
  rs29765903
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:33578138 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATGCAGTAAA GAAGAATGGG AAATGCTCAG TTACTGAGAC CCATATCCCA CACTCCGCTG
  TCTTAATTTG ATGCTTCTAA ATCTCAAGTG AGGCTCCTTA ACTTTATTTT CAGGGTAGAT
  GAACTGAAGC AATGATCCTT TCAATTCCTA GGCTAACCAC AATCAGATCA TAGAGTCCCC
  AGTAAGTCAT TTCTGAGCCT CAGTTTCTTT ATCTGTAAGG TGGGGGTAGC AACAGTTCCA
  ACCAGGGACA CTGTGGAGCA CACAGGTTCC AAGATGGGCT ACCACCTGAG CCCTCTTGGT
  K
  GTTTCTTTTT TTTTTTTTTT TCGAGACAGG GTTTCTCTGT GTAGCCATGG CTGTTCTGGA
  ACTCACTTTG TAGACCAGGC TGGCCTCGAA CTCAGAAATC CGCCTGCCTC TGCCTCCCAA
  GTGCTGGGAT TAAAGGCGTG CTCCACCACA CAAGGGGATG GTCTTTACCT TGCATAGATT
  GCTTCTGGTT TCTGGGGTAG GATGGGGCTC CTGATTCACT CACATTCTGA GTGGCAGAAG
  CTTGCCACAC AGTGGGGCTA GGCTGCCTTG CTTGGCATGG TGACTTTGTG AGAAGTAAGG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45360513	mCV23079070	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29765903					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:33578138 () rs orientation: forward

Symbol	Name	Function Class
Rr367177	regulatory region 367177	707 bp upstream
Rr555308	regulatory region 555308	490 bp distal
Rr555309	regulatory region 555309	1075 bp proximal
Rr555310	regulatory region 555310	1512 bp proximal
Rr555311	regulatory region 555311	1736 bp proximal