rs29766747 SNP Detail

Summary

• ID
  rs29766747
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:87744041 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATATACG TTATTCTTTT
  TTTTTTTAAT ATACGTTATT CTTAAGAACT TTAAAATCTT ATGAAATTGT GATCACGTTC
  CTTCTAACTT GAACTGGTAT CAGGAAATGT ATTGATGAAA CTTTTCTTTT CAAGACAGGA
  ACTAAGAAAT TAACTCCCAA GGTCATAGCT TAGATAACAA AGCAATAACA AGGTCAAACT
  M
  ATAGATAACA AGTAAGTAAG GTATTTTCTA AACAGACTAG ACTTTTTTGC AAACAAAACA
  GCAGTTCCAA AGTTGCTGAG CTGCTAAGCT CTGCCATGTG AACTGCCCCT GACTTTGCGT
  TTAAGAAATG AGATGGTGTT GGTGCTTGTC TGTCTGTCTC TGCTGTAATT TACTCTCTGC
  AGTTCTGGTT CACACCATCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48385165	NES12275509	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	C	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29766747					SNP	A	A	A	A	A	A	A	A	A	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48385165	NES12275509	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:87744041 () rs orientation: forward

Symbol	Name	Function Class
Calm2	calmodulin 2	within coordinates
Tssr149770	transcription start site region 149770	1906 bp downstream