rs29767136 SNP Detail

Summary

• ID
  rs29767136
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:69578335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACT CACTCCTGTC CACTCTGCTC
  K
  CTCAATCCCT GCTTGCTTTG GCCCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45361787	mCV25080772	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss146730181	ENSMUSSNP702104	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss320332155	CHEV_2_69586048	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29767136					SNP	G	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:69578335 () rs orientation: forward

Symbol	Name	Function Class
Ppig	peptidyl-prolyl isomerase G (cyclophilin G)	within coordinates
Tssr18138	transcription start site region 18138	1952 bp downstream
Tssr18139	transcription start site region 18139	959 bp upstream
Tssr18140	transcription start site region 18140	997 bp upstream
Tssr18141	transcription start site region 18141	1012 bp upstream
Tssr18142	transcription start site region 18142	1035 bp upstream
Tssr18143	transcription start site region 18143	1067 bp upstream
Tssr18144	transcription start site region 18144	1271 bp upstream
Tssr18145	transcription start site region 18145	1387 bp upstream
Tssr18146	transcription start site region 18146	1488 bp upstream
Tssr18147	transcription start site region 18147	1537 bp upstream
Tssr18148	transcription start site region 18148	1576 bp upstream
Tssr18149	transcription start site region 18149	1600 bp upstream
Tssr18150	transcription start site region 18150	1646 bp upstream
Tssr18151	transcription start site region 18151	1661 bp upstream
Tssr18152	transcription start site region 18152	1737 bp upstream
Tssr18153	transcription start site region 18153	1822 bp upstream
Tssr18154	transcription start site region 18154	1926 bp upstream
Tssr18155	transcription start site region 18155	1947 bp upstream
Tssr18156	transcription start site region 18156	1989 bp upstream