rs29767181 SNP Detail

Summary

• ID
  rs29767181
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:154031305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAAACGTG TTCACAAATT
  GATGATGTGC ATAGAACATT TATAGAAAGT ATGCGCACAA TTCGAAACTC CCCAGGGGCC
  ATTTGAAAGA AGAATAAATT AGCACATCTT GGCACATTCA TACAGTGGAA GACTGCGTCC
  CTGTCAGGAG GATCAGCTGC AGGCCAGATG GACCAAAACA ATATCAGAGA GCGTTACTGG
  R
  ATGTGCTCAC GTGCTTGAGA CCATCCAACA GACTAGACTA ATCTATGGTG GGGAAAAGTT
  AGATCTGATC CCTGCTGTGG GGGCTCAAGA AGTACTGGCT GGGAAGGATT ACAAGGGACA
  GGGCCTTTCT TGGGTGATGG TGATGGTCTG AGTCCTGACA GGAAGGGGAG GGCTGGTTAC
  ATGGGTATGT CCCTTTGTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45361893	mCV23867908	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss148023852	ENSMUSSNP1680978	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss320569680	CHEV_2_154015121	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29767181					SNP	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:154031305 () rs orientation: forward

Symbol	Name	Function Class
Bpifb1	BPI fold containing family B, member 1	1433 bp upstream
Rr567773	regulatory region 567773	1588 bp distal
Rr567774	regulatory region 567774	943 bp proximal
Rr567775	regulatory region 567775	1444 bp proximal
Rr567776	regulatory region 567776	1670 bp proximal
Tssr20971	transcription start site region 20971	1364 bp upstream
Tssr20972	transcription start site region 20972	1378 bp upstream
Tssr20973	transcription start site region 20973	1391 bp upstream
Tssr20974	transcription start site region 20974	1421 bp upstream
Tssr20975	transcription start site region 20975	1448 bp upstream
Tssr20976	transcription start site region 20976	1883 bp upstream