rs29768796 SNP Detail

Summary

• ID
  rs29768796
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:65940736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAG ACAGAGTTAA AAATGGTAAC
  Y
  GAAGCAGCCT GAGAAGTAAA AATGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39612963	mCV23207163	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss147320198	ENSMUSSNP3436807	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29768796					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:65940736 () rs orientation: forward

Symbol	Name	Function Class
Rr539619	regulatory region 539619	1482 bp distal
Sec11c	SEC11 homolog C, signal peptidase complex subunit	within coordinates
Tssr151702	transcription start site region 151702	1528 bp downstream