rs29769274 SNP Detail

Summary

• ID
  rs29769274
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:19055322 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGACAGGATT TAACGTATTA AATTGTTCCA CTGCCCTTTA
  GACTAGTCTG AGTACAGTTG TGTGCTAGTG AAAATGATGA ATGTCTGCTC TTAATTAAAA
  Y
  TTTAAACTAT CCACGTGGCA CAGAATTTGC TCTTGTGTAA AAGTCTCAGA ATAAATGCCT
  TTTAAGGCAT CACCCTTAGT TTCTGTAAGC GAAAACGGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45359670	mCV23182872	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss146312977	ENSMUSSNP221043	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29769274					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:19055322 () rs orientation: forward

Symbol	Name	Function Class
Gm75706	predicted gene, 75706	within coordinates
Rr63907	regulatory region 63907	1950 bp distal
Tssr16405	transcription start site region 16405	433 bp downstream